RESTOVER

NAME
SYNOPSIS
DESCRIPTION
OPTIONS
BUGS
SEE ALSO
AUTHOR
COPYRIGHT

NAME

restover − Find restriction enzymes producing a specific overhang

SYNOPSIS

restover −sequence seqall −datafile datafile −mfile datafile −seqcomp string −min integer −max integer −single boolean −threeprime boolean −blunt boolean −sticky boolean −ambiguity boolean −plasmid boolean −methylation boolean −commercial boolean −html boolean −limit boolean −alphabetic boolean −fragments boolean −outfile outfile

restover −help

DESCRIPTION

restover is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Restriction" command group(s).

OPTIONS

Input section
−sequence
seqall

−datafile datafile

−mfile datafile

Default value: Emethylsites.dat

Required section
−seqcomp
string

Advanced section
−min
integer

Default value: 1

−max integer

Default value: 2000000000

−single boolean

Default value: N

−threeprime boolean

Default value: N

−blunt boolean

Default value: Y

−sticky boolean

Default value: Y

−ambiguity boolean

Default value: Y

−plasmid boolean

Default value: N

−methylation boolean

If this is set then RE recognition sites will not match methylated bases. Default value: N

−commercial boolean

Default value: Y

Output section
−html
boolean

Default value: N

−limit boolean

Default value: Y

−alphabetic boolean

Default value: N

−fragments boolean

Default value: N

−outfile outfile

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

restover is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian−med−packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.